Interface Specification

The program interface of a visualisation subtask module is a Matlab function with the following structure.

function InspectionModule(varargin)
% 
% Code for a generic visualisation module
%
  
% 
% The string below defines that this is an inspection module.
% The latter part defines the text that will appear in the main
% interface.
%
% INSPECTDESC generic inspection module
%
  
% Two input parameters needed:
% 
% 1) A string with contents 'LoadData'
%
% 2) A struct named DataStruct, with the following fields:
%
%   
% imgPET - Volume data containing the Reslice image (un-transformed!)
%
% imgMR  - Volume data containing the Standard image (un-transformed!)
% 
% hdrPET - PET Analyze hdr struct, format defined in ReadAnalyzeHdr.m 
%
% hdrMR  - MR Analyze hdr struct, format defined in ReadAnalyzeHdr.m 
%
% A      - Homogenous transformation matrix between RES and STD spaces
%
% scales - Optional field, struct containing fields
%          STD and HDR with min/max values for colormap scaling.
%